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deoB protein (Acidaminococcus intestini) - STRING interaction network
"deoB" - Phosphopentomutase in Acidaminococcus intestini
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose (406 aa)    
Predicted Functional Partners:
udp
Uridine phosphorylase (262 aa)
 
 
  0.993
Acin_1112
NUDIX hydrolase (181 aa)
       
    0.934
rpiB
Ribose-5-phosphate isomerase B (146 aa)
         
  0.909
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of ribose 1,5-bisphosphate. Catalyzes the transfer of pyrophosphoryl group from ATP to ribose- 5-phosphate to yield phosphoribosyl diphosphate (PRPP) and AMP (321 aa)
         
  0.908
tktA
Transketolase (663 aa)
     
 
    0.902
Acin_1948
Deoxyribose-phosphate aldolase (45 aa)
         
    0.900
Acin_1314
Deoxyribose-phosphate aldolase (130 aa)
         
    0.900
Acin_0373
Hypothetical protein (193 aa)
              0.840
cdd
Cytidine deaminase (128 aa)
 
     
  0.535
nagA
N-acetylglucosamine-6-phosphate deacetylase (380 aa)
           
  0.524
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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