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Acin_0378 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0378" - Hypothetical protein in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0378Hypothetical protein (234 aa)    
Predicted Functional Partners:
Acin_0379
Iron-regulated ABC transporter membrane (477 aa)
 
  0.999
Acin_0380
FeS assembly protein SufD (373 aa)
 
 
  0.995
sufS
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (406 aa)
 
   
  0.989
Acin_0382
Hypothetical protein (151 aa)
 
   
  0.927
iscS
Cysteine desulfurase (448 aa)
         
  0.579
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (692 aa)
   
        0.483
Acin_0377
Gluconate transporter (461 aa)
              0.433
Acin_2255
Transcriptional regulator (141 aa)
         
  0.429
pheT
phenylalanyl-tRNA synthetase subunit beta (811 aa)
   
        0.418
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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