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Acin_0406 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0406" - Endonuclease in Acidaminococcus intestini
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0406Endonuclease (117 aa)    
Predicted Functional Partners:
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (270 aa)
 
      0.975
Acin_0407
Magnesiumchelatase (508 aa)
 
        0.880
Acin_0404
Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (290 aa)
              0.667
lepB
Signal peptidase I (182 aa)
   
        0.666
Acin_1181
DNA protecting protein dprA (367 aa)
 
        0.622
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (113 aa)
              0.585
Acin_0408
Hypothetical protein (41 aa)
              0.550
trmD
tRNA-(guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (246 aa)
              0.518
rimM
16S rRNA processing protein rimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (167 aa)
              0.518
rpsP
30S ribosomal protein S16 (113 aa)
              0.483
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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