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Acin_0414 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0414" - Aspartate aminotransferase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0414Aspartate aminotransferase (398 aa)    
Predicted Functional Partners:
pheA
Chorismate mutase (282 aa)
 
  0.969
Acin_2417
L-lactate dehydrogenase (317 aa)
   
 
  0.951
Acin_0505
L-lactate dehydrogenase (319 aa)
   
 
  0.951
Acin_0025
Prephenate dehydrogenase tyrA (288 aa)
       
  0.940
Acin_0412
Aminotransferase (416 aa)
   
  0.929
Acin_0586
Dehydrogenase (412 aa)
   
 
  0.925
lysC
Aspartate kinase (410 aa)
   
  0.924
Acin_1544
Hypothetical protein (392 aa)
   
0.923
Acin_2049
Aminotransferase (391 aa)
 
   
0.922
argG
Argininosuccinate synthase (407 aa)
   
  0.920
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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