STRINGSTRING
Acin_0466 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0466" - Beta-lactamase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0466Beta-lactamase (616 aa)    
Predicted Functional Partners:
Acin_0467
O-succinylbenzoate-CoA synthase (329 aa)
 
          0.742
Acin_2464
Alpha/beta hydrolase (346 aa)
 
        0.599
Acin_0468
Hypothetical protein (392 aa)
              0.583
Acin_0469
Beta-lactamase (269 aa)
         
  0.509
Acin_1467
Metal-dependent phosphohydrolase (255 aa)
   
          0.503
polA
DNA polymerase I (873 aa)
         
  0.495
Acin_2254
Phytase (326 aa)
   
          0.441
Acin_0749
Hypothetical protein (282 aa)
   
        0.418
Acin_2226
Hypothetical protein (530 aa)
   
          0.402
Acin_0190
Lipolytic protein (486 aa)
   
          0.402
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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