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ugd protein (Acidaminococcus intestini) - STRING interaction network
"ugd" - UDPglucose 6-dehydrogenase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugdUDPglucose 6-dehydrogenase (411 aa)    
Predicted Functional Partners:
Acin_0485
UTP-glucose-1-phosphate uridylyltransferase (292 aa)
   
  0.988
Acin_0072
NAD-dependent epimerase/dehydratase (326 aa)
   
 
  0.948
Acin_2436
NAD-dependent epimerase/dehydratase (315 aa)
   
 
  0.947
Acin_1136
NAD-dependent epimerase/dehydratase (307 aa)
   
 
  0.947
Acin_2351
UDP-glucose 4-epimerase (328 aa)
   
 
  0.946
Acin_0988
UTP-glucose-1-phosphate uridylyltransferase (295 aa)
   
  0.944
Acin_0484
Undecaprenyl-phosphate galactose phosphotransferase (456 aa)
   
   
  0.821
Acin_0487
Hypothetical protein (415 aa)
              0.792
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (208 aa)
   
        0.607
Acin_0998
Hypothetical protein (359 aa)
 
   
  0.573
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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