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Acin_0545 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0545" - Sodium-dicarboxylate symporter in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0545Sodium-dicarboxylate symporter (396 aa)    
Predicted Functional Partners:
Acin_0544
L-serine dehydratase, iron-sulfur-dependent subunit beta (222 aa)
   
        0.730
Acin_0543
L-serine deaminase (296 aa)
   
        0.702
Acin_0546
Transcriptional regulator (293 aa)
   
   
  0.610
pgk
Phosphoglycerate kinase (641 aa)
   
   
  0.462
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (68 aa)
   
        0.432
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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