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rpmE protein (Acidaminococcus intestini) - STRING interaction network
"rpmE" - 50S ribosomal protein L31 in Acidaminococcus intestini
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rpmE50S ribosomal protein L31; Binds the 23S rRNA (68 aa)    
Predicted Functional Partners:
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (113 aa)
   
 
  0.982
rplQ
50S ribosomal protein L17 (112 aa)
   
 
  0.977
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (128 aa)
   
 
  0.976
rplR
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (103 aa)
   
 
  0.964
rpmB
50S ribosomal protein L28 (63 aa)
   
 
  0.958
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (177 aa)
   
 
  0.952
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
 
 
  0.949
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (150 aa)
     
 
  0.943
rplO
50S ribosomal protein L15; Binds to the 23S rRNA (146 aa)
   
 
  0.932
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (209 aa)
   
 
  0.929
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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