STRINGSTRING
comEB protein (Acidaminococcus intestini) - STRING interaction network
"comEB" - dCMP deaminase in Acidaminococcus intestini
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comEBdCMP deaminase (153 aa)    
Predicted Functional Partners:
Acin_1848
Deoxyuridine 5’-triphosphate nucleotidohydrolase (208 aa)
   
 
  0.945
Acin_1126
Deoxyuridine 5`-triphosphate nucleotidohydrolase (155 aa)
   
 
  0.945
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (205 aa)
     
  0.917
thyX
Thymidylate synthase; Catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate (234 aa)
       
    0.905
cmk
Cytidylate kinase (223 aa)
       
    0.901
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (210 aa)
   
        0.890
Acin_0527
Late competence protein comEA (210 aa)
         
  0.773
rpiB
Ribose-5-phosphate isomerase B (146 aa)
              0.763
Acin_0554
Hypothetical protein (185 aa)
              0.696
Acin_0551
Putative translation factor (SUA5); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (371 aa)
              0.669
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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