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potC protein (Acidaminococcus intestini) - STRING interaction network
"potC" - Binding-protein-dependent transport system inner membrane protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potCBinding-protein-dependent transport system inner membrane protein (265 aa)    
Predicted Functional Partners:
potD
Hypothetical protein (353 aa)
 
  0.999
potA
ABC spermidine/putrescine transporter (335 aa)
 
  0.998
potB
ABC spermidine/putrescine transporter (286 aa)
 
0.998
Acin_0237
ABC transporter-like protein (356 aa)
     
  0.749
Acin_0584
Hypothetical protein (46 aa)
              0.617
Acin_0585
Hydrolase (407 aa)
              0.533
Acin_0579
Hypothetical protein (80 aa)
              0.517
Acin_0772
Recombination factor protein rarA (442 aa)
   
      0.453
Acin_2459
Hypothetical protein (307 aa)
     
        0.416
Acin_1750
Hypothetical protein (306 aa)
     
        0.416
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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