STRINGSTRING
Acin_0585 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0585" - Hydrolase in Acidaminococcus intestini
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0585Hydrolase (407 aa)    
Predicted Functional Partners:
Acin_0584
Hypothetical protein (46 aa)
              0.721
Acin_0586
Dehydrogenase (412 aa)
              0.552
potA
ABC spermidine/putrescine transporter (335 aa)
              0.538
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate (308 aa)
   
        0.537
potB
ABC spermidine/putrescine transporter (286 aa)
              0.533
potC
Binding-protein-dependent transport system inner membrane protein (265 aa)
              0.533
potD
Hypothetical protein (353 aa)
              0.533
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (128 aa)
   
      0.492
queF
GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (154 aa)
         
  0.430
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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