STRINGSTRING
Acin_0598 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0598" - Dicarboxylate carrier protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0598Dicarboxylate carrier protein (419 aa)    
Predicted Functional Partners:
Acin_0597
6-phosphogluconolactonase (346 aa)
              0.834
Acin_0596
Aconitate hydratase (649 aa)
   
        0.792
Acin_0595
Transcriptional regulator (346 aa)
              0.578
Acin_0116
Hypothetical protein (395 aa)
   
          0.480
Acin_1153
Hypothetical protein (386 aa)
   
          0.443
Acin_1650
Hypothetical protein (481 aa)
         
  0.416
Acin_0832
Potassium uptake protein ktrB (442 aa)
         
  0.416
Acin_1651
Hypothetical protein (452 aa)
         
  0.405
Acin_0833
Potassium transport system NAD-binding component (219 aa)
         
  0.405
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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