STRINGSTRING
Acin_0605 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0605" - Transcriptional regulator in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0605Transcriptional regulator (298 aa)    
Predicted Functional Partners:
Acin_0606
Hypothetical protein (181 aa)
              0.787
aphB
lysR-family transcriptional regulator (287 aa)
   
          0.762
Acin_2419
Transcriptional regulator (331 aa)
   
          0.730
Acin_2117
lysR-family transcriptional regulator (314 aa)
   
          0.638
Acin_0607
Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (119 aa)
   
        0.631
Acin_0671
Flavodoxin (209 aa)
 
          0.491
Acin_2285
Transcriptional regulator (331 aa)
       
 
  0.480
Acin_1748
Hypothetical protein (214 aa)
 
          0.456
Acin_0670
Hypothetical protein (162 aa)
 
          0.456
Acin_1637
Thioredoxin reductase (558 aa)
         
  0.429
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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