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Acin_0617 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0617" - Transcriptional regulator in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0617Transcriptional regulator (263 aa)    
Predicted Functional Partners:
garD
Galactarate dehydratase (522 aa)
 
   
  0.700
Acin_2207
Hypothetical protein (215 aa)
 
   
  0.603
Acin_0619
Nucleoside recognition protein (442 aa)
              0.572
Acin_0620
Hypothetical protein (72 aa)
              0.567
Acin_0616
Nucleoside recognition protein (434 aa)
              0.563
Acin_0621
2-oxoglutarate ferredoxin oxidoreductase subunit alpha (346 aa)
              0.498
Acin_0623
2-oxoglutarate ferredoxin oxidoreductase (181 aa)
              0.484
Acin_0622
Ketoisovalerate oxidoreductase subunit vorA (246 aa)
              0.484
Acin_0915
lysR-family transcriptional regulator (324 aa)
 
   
  0.451
Acin_1091
3-isopropylmalate dehydratase large subunit (598 aa)
   
   
  0.451
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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