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msbA protein (Acidaminococcus intestini) - STRING interaction network
"msbA" - ABC lipid A exporter in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msbAABC lipid A exporter (589 aa)    
Predicted Functional Partners:
znuC
High-affinity zinc uptake system ATP-binding protein (223 aa)
 
 
 
0.957
potA
ABC spermidine/putrescine transporter (335 aa)
   
 
0.951
Acin_0237
ABC transporter-like protein (356 aa)
 
     
0.950
Acin_0884
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (381 aa)
         
0.950
Acin_2198
ABC methionine transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (340 aa)
         
0.950
tauB
Nitrate transport ATP-binding protein (229 aa)
 
     
  0.949
pstB
Phosphate import ATP-binding protein pstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system (258 aa)
         
0.949
Acin_1580
ABC transporter (212 aa)
 
0.944
Acin_0433
Hemin importer ATP-binding subunit (264 aa)
 
 
 
0.943
Acin_0880
ABC transporter ATP-binding protein (222 aa)
 
0.941
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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