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mtnN protein (Acidaminococcus intestini) - STRING interaction network
"mtnN" - Nucleoside phosphorylase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtnNNucleoside phosphorylase (247 aa)    
Predicted Functional Partners:
luxS
Quorum-sensing autoinducer; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) (158 aa)
 
   
  0.975
Acin_1351
DNA-cytosine methyltransferase (503 aa)
       
  0.913
Acin_1317
DNA-cytosine methyltransferase (355 aa)
       
  0.913
mtaP
Purine nucleoside phosphorylase (268 aa)
       
  0.906
Acin_1149
Amidohydrolase (362 aa)
         
    0.900
Acin_0658
Hypothetical protein (240 aa)
              0.859
Acin_0657
Hypothetical protein (41 aa)
              0.648
fabD
Malonyl CoA-acyl carrier protein transacylase (315 aa)
   
        0.582
Acin_0656
Hypothetical protein (166 aa)
              0.556
holA
DNA polymerase III subunit delta (361 aa)
 
          0.459
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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