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Acin_0664 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0664" - Hypothetical protein in Acidaminococcus intestini
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0664Hypothetical protein (866 aa)    
Predicted Functional Partners:
Acin_0730
Hypothetical protein (319 aa)
   
          0.585
Acin_0075
Hypothetical protein (592 aa)
   
          0.577
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (182 aa)
   
 
      0.542
Acin_0067
Hypothetical protein (397 aa)
   
          0.516
Acin_0814
Coproporphyrinogen III oxidase (468 aa)
   
          0.501
mrdA
Penicillin-binding protein 2 (612 aa)
     
      0.488
ftsI
Peptidoglycan glycosyltransferase (672 aa)
     
      0.488
rplW
50S ribosomal protein L25; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (76 aa)
       
      0.473
rplB
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (259 aa)
       
      0.473
rpmC
Large subunit ribosomal protein L29 (56 aa)
       
      0.473
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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