STRINGSTRING
Acin_0668 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0668" - Autotransporter in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0668Autotransporter (424 aa)    
Predicted Functional Partners:
Acin_0667
Hypothetical protein (643 aa)
              0.859
Acin_0730
Hypothetical protein (319 aa)
   
          0.572
Acin_0075
Hypothetical protein (592 aa)
   
          0.570
Acin_0670
Hypothetical protein (162 aa)
     
      0.568
Acin_0671
Flavodoxin (209 aa)
     
      0.545
Acin_0669
Nitroreductase (170 aa)
              0.519
Acin_0666
Hypothetical protein (40 aa)
              0.506
mrdA
Penicillin-binding protein 2 (612 aa)
     
      0.488
ftsI
Peptidoglycan glycosyltransferase (672 aa)
     
      0.488
rplW
50S ribosomal protein L25; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (76 aa)
       
      0.473
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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