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crt protein (Acidaminococcus intestini) - STRING interaction network
"crt" - enoyl-CoA hydratase/carnithine racemase in Acidaminococcus intestini
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtenoyl-CoA hydratase/carnithine racemase (262 aa)    
Predicted Functional Partners:
Acin_0721
3-hydroxybutyryl-CoA dehydrogenase (285 aa)
  0.999
Acin_1270
3-hydroxybutyryl-CoA dehydrogenase (303 aa)
  0.998
atoB
acetyl-CoA acetyltransferase (393 aa)
  0.997
Acin_0720
acyl-CoA dehydrogenase (384 aa)
 
  0.996
Acin_0489
butyryl-CoA dehydrogenase (591 aa)
 
  0.996
Acin_0440
Hypothetical protein (395 aa)
  0.995
Acin_0473
acyl-CoA dehydrogenase (377 aa)
 
  0.993
Acin_0318
glutaconyl-CoA decarboxylase subunit alpha (586 aa)
   
 
  0.948
Acin_2034
Gamma-aminobutyrate metabolism dehydratase/isomerase (473 aa)
 
   
  0.921
mmdC
glutaconyl-CoA decarboxylase subunit gamma (145 aa)
   
 
  0.911
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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