• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Acin_0772 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0772" - Recombination factor protein rarA in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0772Recombination factor protein rarA; COG2256 (442 aa)    
Predicted Functional Partners:
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (505 aa)
   
        0.957
cinA
Putative competence-damage inducible protein; COG1546; Belongs to the CinA family (413 aa)
         
  0.870
Acin_0528
annotation not available (766 aa)
   
   
  0.807
acpS
Holo-[acyl-carrier-protein] synthase; Transfers the 4’-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family (124 aa)
              0.785
rpsA
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; COG0761 (635 aa)
   
        0.781
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (198 aa)
   
   
  0.732
metB
Cystathionine gamma-lyase; COG0626 (378 aa)
   
   
  0.725
pheT
annotation not available (811 aa)
   
        0.723
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (644 aa)
   
        0.719
potC
Binding-protein-dependent transport systems inner membrane component; COG1177 (265 aa)
     
        0.677
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
Server load: low (9%) [HD]