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wbpO protein (Acidaminococcus intestini) - STRING interaction network
"wbpO" - Nucleotide sugar dehydrogenase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wbpONucleotide sugar dehydrogenase (443 aa)    
Predicted Functional Partners:
wecB
UDP-N-acetylglucosamine 2-epimerase (386 aa)
 
 
  0.984
Acin_0824
Hypothetical protein (295 aa)
              0.832
Acin_0825
Glycosyl transferase family protein (574 aa)
 
          0.702
Acin_0072
NAD-dependent epimerase/dehydratase (326 aa)
   
 
  0.689
Acin_2436
NAD-dependent epimerase/dehydratase (315 aa)
   
 
  0.687
Acin_1136
NAD-dependent epimerase/dehydratase (307 aa)
   
 
  0.687
Acin_0998
Hypothetical protein (359 aa)
   
 
  0.687
hldD
ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose (321 aa)
   
 
  0.687
Acin_0822
Hypothetical protein (120 aa)
              0.684
Acin_0826
Hypothetical protein (627 aa)
 
          0.666
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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