STRINGSTRING
Acin_0867 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0867" - Peptidase M20 in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0867Peptidase M20 (449 aa)    
Predicted Functional Partners:
Acin_0866
Hypothetical protein (274 aa)
         
  0.859
polA
DNA polymerase I (873 aa)
 
   
  0.685
Acin_1637
Thioredoxin reductase (558 aa)
   
 
  0.599
argG
Argininosuccinate synthase (407 aa)
   
 
  0.529
argC
N-acetyl-gamma-glutamyl-phosphate reductase (307 aa)
   
 
  0.511
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (224 aa)
 
 
      0.508
gidA
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (626 aa)
     
 
  0.486
fruA
PTS system protein (636 aa)
     
      0.471
livK
Extracellular ligand-binding receptor (415 aa)
       
 
  0.470
argH
Argininosuccinate lyase (470 aa)
   
   
  0.458
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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