STRINGSTRING
phoA protein (Acidaminococcus intestini) - STRING interaction network
"phoA" - Alkaline phosphatase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoAAlkaline phosphatase (617 aa)    
Predicted Functional Partners:
Acin_0881
Hypothetical protein (145 aa)
 
          0.973
rplQ
50S ribosomal protein L17 (112 aa)
   
 
      0.973
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (177 aa)
       
      0.970
Acin_0879
Hypothetical protein (407 aa)
 
          0.969
ftsY
Signal recognition particle-docking protein ftsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (304 aa)
     
 
  0.965
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (364 aa)
       
  0.901
folE2
Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate (255 aa)
         
  0.901
Acin_1458
Queuosine biosynthesis protein queD (120 aa)
         
    0.900
Acin_0462
6-pyruvoyl tetrahydrobiopterin synthase (108 aa)
         
    0.900
rplW
50S ribosomal protein L25; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (76 aa)
       
      0.863
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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