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Acin_0980 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0980" - Hypothetical protein in Acidaminococcus intestini
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Acin_0980Hypothetical protein (75 aa)    
Predicted Functional Partners:
Acin_0979
Crispr-associated protein (273 aa)
 
   
  0.947
cas9
Crispr-associated protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The t [...] (1358 aa)
 
   
  0.927
Acin_0981
Hypothetical protein (222 aa)
              0.868
Acin_2006
Hypothetical protein (610 aa)
   
          0.644
Acin_1368
Hypothetical protein (554 aa)
   
          0.583
Acin_1369
Hypothetical protein (326 aa)
   
          0.564
Acin_2100
Hypothetical protein (576 aa)
   
          0.517
Acin_2085
Hypothetical protein (101 aa)
   
          0.469
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (672 aa)
     
        0.438
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (198 aa)
     
        0.424
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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