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rfbD protein (Acidaminococcus intestini) - STRING interaction network
"rfbD" - dTDP-4-dehydrorhamnose reductase in Acidaminococcus intestini
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbDdTDP-4-dehydrorhamnose reductase (309 aa)    
Predicted Functional Partners:
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (208 aa)
 
  0.999
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (392 aa)
     
  0.982
rfbB
dTDP-glucose 4,6-dehydratase (342 aa)
 
 
  0.966
wbpP
UDP-N-acetylglucosamine 4-epimerase (233 aa)
 
 
  0.948
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (294 aa)
 
 
  0.940
Acin_1006
Hypothetical protein (325 aa)
   
   
  0.816
Acin_2351
UDP-glucose 4-epimerase (328 aa)
     
 
  0.697
Acin_1001
Glycosyl transferase family protein (309 aa)
 
   
  0.633
Acin_2436
NAD-dependent epimerase/dehydratase (315 aa)
   
 
  0.592
Acin_1136
NAD-dependent epimerase/dehydratase (307 aa)
   
 
  0.592
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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