STRINGSTRING
Acin_1006 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1006" - Hypothetical protein in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1006Hypothetical protein (325 aa)    
Predicted Functional Partners:
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (208 aa)
   
   
  0.874
rfbD
dTDP-4-dehydrorhamnose reductase (309 aa)
   
   
  0.816
Acin_0484
Undecaprenyl-phosphate galactose phosphotransferase (456 aa)
 
   
  0.713
wbpP
UDP-N-acetylglucosamine 4-epimerase (233 aa)
   
   
  0.698
Acin_1001
Glycosyl transferase family protein (309 aa)
 
          0.642
Acin_2351
UDP-glucose 4-epimerase (328 aa)
 
   
  0.634
Acin_2436
NAD-dependent epimerase/dehydratase (315 aa)
 
   
  0.566
Acin_1136
NAD-dependent epimerase/dehydratase (307 aa)
 
   
  0.532
Acin_1797
Glycosyl transferase family protein (305 aa)
   
   
  0.525
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate (308 aa)
   
      0.511
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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