STRINGSTRING
Acin_1033 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1033" - Methyltransferase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1033Methyltransferase (242 aa)    
Predicted Functional Partners:
holB
DNA polymerase III delta’ subunit (326 aa)
   
        0.890
Acin_1032
Hypothetical protein (281 aa)
              0.887
Acin_1036
Hydrolase (261 aa)
 
          0.857
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (644 aa)
 
          0.842
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (264 aa)
   
   
  0.810
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (205 aa)
   
        0.796
ldcC
Orn/lys/arg decarboxylase (486 aa)
              0.790
Acin_1630
Hypothetical protein (402 aa)
 
     
  0.667
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning (1186 aa)
 
        0.553
Acin_2414
Diguanylate cyclase with phosphoesterase (682 aa)
   
          0.491
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
Server load: low (6%) [HD]