STRINGSTRING
Acin_1087 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1087" - Transcriptional regulator in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1087Transcriptional regulator (343 aa)    
Predicted Functional Partners:
Acin_1088
Carboxylesterase A (298 aa)
              0.565
Acin_1086
Pyruvate carboxylase subunit B (461 aa)
              0.490
Acin_1085
Hypothetical protein (129 aa)
              0.478
nagA
N-acetylglucosamine-6-phosphate deacetylase (380 aa)
   
          0.456
Acin_0974
Hypothetical protein (309 aa)
   
          0.448
Acin_2123
Hypothetical protein (269 aa)
   
          0.438
garD
Galactarate dehydratase (522 aa)
   
          0.434
Acin_0714
Hypothetical protein (308 aa)
   
          0.400
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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