STRINGSTRING
ptb protein (Acidaminococcus intestini) - STRING interaction network
"ptb" - Phosphotransbutyrylase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptbPhosphotransbutyrylase (298 aa)    
Predicted Functional Partners:
Acin_1089
Hypothetical protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1168 aa)
   
 
  0.984
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction (398 aa)
 
 
  0.978
buk
Butyrate kinase (370 aa)
 
     
  0.971
Acin_2290
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1167 aa)
   
 
  0.964
Acin_2032
Pyruvate-ferredoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1178 aa)
   
 
  0.964
Acin_0057
Pyruvate ferredoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1134 aa)
   
 
  0.964
Acin_1091
3-isopropylmalate dehydratase large subunit (598 aa)
         
  0.831
Acin_1090
3-isopropylmalate dehydratase large subunit (369 aa)
         
  0.770
polA
DNA polymerase I (873 aa)
         
  0.662
pyk
Pyruvate kinase (611 aa)
   
   
  0.656
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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