STRINGSTRING
buk protein (Acidaminococcus intestini) - STRING interaction network
"buk" - Butyrate kinase in Acidaminococcus intestini
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bukButyrate kinase (370 aa)    
Predicted Functional Partners:
ptb
Phosphotransbutyrylase (298 aa)
 
     
  0.971
Acin_1093
Citrate carrier protein (445 aa)
              0.767
pta
Phosphate acetyltransferase (337 aa)
       
  0.753
Acin_1089
Hypothetical protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1168 aa)
              0.597
Acin_1095
Hypothetical protein (198 aa)
              0.526
Acin_1091
3-isopropylmalate dehydratase large subunit (598 aa)
              0.515
Acin_0623
2-oxoglutarate ferredoxin oxidoreductase (181 aa)
 
          0.511
Acin_1090
3-isopropylmalate dehydratase large subunit (369 aa)
              0.489
Acin_1566
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (178 aa)
 
          0.474
era
GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (306 aa)
           
  0.436
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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