STRINGSTRING
Acin_1100 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1100" - Hypothetical protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1100Hypothetical protein (172 aa)    
Predicted Functional Partners:
Acin_1099
Hypothetical protein (191 aa)
 
          0.926
Acin_1101
Hypothetical protein (74 aa)
              0.869
Acin_0841
OstA family protein (533 aa)
   
          0.753
Acin_1106
Polyprenyl synthetase (292 aa)
              0.729
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (442 aa)
              0.729
Acin_1103
O-sialoglycoprotein endopeptidase (322 aa)
              0.729
nusB
NusB antitermination factor; Involved in the transcription termination process (130 aa)
              0.729
Acin_0751
Copper amine oxidase (357 aa)
   
          0.727
Acin_1477
Hypothetical protein (111 aa)
   
          0.713
Acin_1775
Hypothetical protein (1439 aa)
   
          0.710
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
Server load: low (7%) [HD]