STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauBNitrate transport ATP-binding protein; COG1116. (229 aa)    
Predicted Functional Partners:
tauC
Taurine transport system permease.
 
 
 0.998
tauA
Nitrogenase cofactor biosynthesis protein nifB; COG0715.
 
 
 0.993
Acin_1118
Conserved hypothetical protein; NOG08140.
       0.782
Acin_0433
Hemin importer ATP-binding subunit.
 
    0.700
znuC
High-affinity zinc uptake system ATP-binding protein.
  
     0.593
Acin_1119
Hypothetical protein; COG3333.
       0.505
Acin_1120
Conserved hypothetical protein.
       0.486
hisZ
ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
  
     0.470
Acin_1121
Tricarboxylate-binding protein.
       0.453
Acin_0695
Conserved hypothetical protein.
  
  
 0.437
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.