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rnhC protein (Acidaminococcus intestini) - STRING interaction network
"rnhC" - Ribonuclease HIII in Acidaminococcus intestini
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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rnhCRibonuclease HIII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (320 aa)    
Predicted Functional Partners:
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (270 aa)
 
   
  0.981
Acin_1133
Hypothetical protein (288 aa)
              0.683
Acin_1132
Hypothetical protein (276 aa)
              0.680
Acin_1136
NAD-dependent epimerase/dehydratase (307 aa)
              0.605
mprF
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host’s immune system (defensins, cathelicidins) and by the competing microorganisms (333 aa)
              0.599
Acin_1137
Hypothetical protein (327 aa)
              0.578
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (754 aa)
           
  0.513
rnmV
Hypothetical protein; Required for correct processing of both the 5’ and 3’ ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step (181 aa)
           
  0.495
Acin_0178
Cobalt transporter (270 aa)
   
     
  0.472
Acin_0179
Cobalt transporter (224 aa)
   
          0.454
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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