STRINGSTRING
Acin_1137 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1137" - Hypothetical protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1137Hypothetical protein (327 aa)    
Predicted Functional Partners:
Acin_1136
NAD-dependent epimerase/dehydratase (307 aa)
              0.829
mprF
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host’s immune system (defensins, cathelicidins) and by the competing microorganisms (333 aa)
              0.829
Acin_2125
TRAP transporter (672 aa)
 
          0.822
Acin_0059
TRAP transporter (660 aa)
 
          0.822
Acin_0061
TRAP transporter (324 aa)
   
          0.777
rnhC
Ribonuclease HIII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (320 aa)
              0.578
Acin_0530
Sodium-glutamate symporter (389 aa)
            0.476
Acin_1133
Hypothetical protein (288 aa)
              0.468
Acin_1132
Hypothetical protein (276 aa)
              0.468
rnj
Beta-lactamase (558 aa)
              0.452
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
Server load: low (3%) [HD]