STRINGSTRING
Acin_1173 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1173" - Pseudouridine synthase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1173Pseudouridine synthase (183 aa)    
Predicted Functional Partners:
Acin_1172
Pseudouridine synthase (73 aa)
 
  0.990
Acin_1174
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (130 aa)
   
   
  0.919
cmk
Cytidylate kinase (223 aa)
 
        0.901
Acin_1171
FAD dependent oxidoreductase (414 aa)
     
      0.899
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase (201 aa)
              0.882
der
Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis (448 aa)
 
   
  0.867
rpsA
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (635 aa)
   
 
  0.790
scpA
Chromosome segregation and condensation protein scpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (249 aa)
   
   
  0.688
Acin_1176
Peptidase M50 (229 aa)
 
        0.672
gpsA
Isopentenyl-diphosphate delta-isomerase (331 aa)
   
        0.651
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
Server load: low (4%) [HD]