STRINGSTRING
Acin_1185 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1185" - Zinc-dependent peptidase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1185Zinc-dependent peptidase (973 aa)    
Predicted Functional Partners:
sfsA
Sugar fermentation stimulation protein (385 aa)
 
          0.712
Acin_1192
Peptidase M24 (350 aa)
   
      0.605
purL
Phosphoribosylformylglycinamidine synthase (1254 aa)
   
        0.551
Acin_0152
Peptidase M24 (411 aa)
   
      0.519
Acin_1638
Hypothetical protein (187 aa)
   
      0.474
Acin_1188
Hypothetical protein (393 aa)
              0.469
Acin_1189
Hypothetical protein (220 aa)
              0.455
Acin_2068
Hypothetical protein (294 aa)
   
          0.446
Acin_0269
Hypothetical protein (335 aa)
       
      0.443
Acin_0268
Allophanate hydrolase subunit 1 (257 aa)
       
      0.443
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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