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Acin_1197 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1197" - Hypothetical protein in Acidaminococcus intestini
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1197Hypothetical protein (78 aa)    
Predicted Functional Partners:
Acin_1196
Hypothetical protein; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (135 aa)
 
          0.908
Acin_1194
Aminodeoxychorismate lyase (338 aa)
              0.869
Acin_1193
Peptidase U32 (407 aa)
              0.869
Acin_1195
Hypothetical protein (104 aa)
              0.868
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (874 aa)
              0.710
Acin_0783
Polysaccharide biosynthesis protein (517 aa)
   
          0.710
greA
GreA/GreB family elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (173 aa)
 
          0.667
Acin_2380
Polysaccharide biosynthesis protein (552 aa)
   
          0.666
Acin_0948
Hypothetical protein (235 aa)
   
          0.647
Acin_0395
Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein (121 aa)
 
     
  0.645
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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