STRINGSTRING
Acin_1241 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1241" - Phage terminase large subunit in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1241Phage terminase large subunit (418 aa)    
Predicted Functional Partners:
Acin_1239
Hypothetical protein (495 aa)
 
          0.879
Acin_1242
Hypothetical protein (151 aa)
              0.859
Acin_1381
Putative head protein (601 aa)
 
        0.858
Acin_1240
Hypothetical protein (468 aa)
              0.848
Acin_1383
Phage minor structural protein GP20 (207 aa)
 
          0.843
Acin_1385
SPP1 family phage portal protein (475 aa)
 
          0.770
Acin_1382
Coat protein (322 aa)
 
          0.695
Acin_1243
Hypothetical protein (75 aa)
              0.665
Acin_1235
Hypothetical protein (288 aa)
 
          0.641
Acin_1403
Hypothetical protein (266 aa)
 
     
  0.612
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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