STRINGSTRING
Acin_1252 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1252" - Recombination and repair protein recT in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1252Recombination and repair protein recT (262 aa)    
Predicted Functional Partners:
Acin_1253
Hypothetical protein (329 aa)
 
     
  0.948
Acin_1251
Hypothetical protein (286 aa)
              0.794
Acin_1250
Hypothetical protein (192 aa)
              0.712
Acin_1249
Hypothetical protein (60 aa)
              0.570
Acin_1836
Hypothetical protein (445 aa)
   
          0.511
Acin_2269
Hypothetical protein (155 aa)
   
          0.496
Acin_1257
Hypothetical protein (107 aa)
              0.470
Acin_1256
Hypothetical protein (58 aa)
              0.470
Acin_1255
Hypothetical protein (151 aa)
              0.470
Acin_1254
Hypothetical protein (95 aa)
              0.470
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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