STRINGSTRING
Acin_1282 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1282" - Transcriptional regulator in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1282Transcriptional regulator (306 aa)    
Predicted Functional Partners:
Acin_2419
Transcriptional regulator (331 aa)
   
          0.777
Acin_1740
Transcriptional regulator (294 aa)
 
     
  0.776
dnaA
Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (458 aa)
     
 
  0.623
Acin_1637
Thioredoxin reductase (558 aa)
         
  0.603
dctA
Sodium-dicarboxylate symporter (420 aa)
              0.586
Acin_1281
Hypothetical protein (276 aa)
              0.582
Acin_2117
lysR-family transcriptional regulator (314 aa)
   
          0.565
Acin_1638
Hypothetical protein (187 aa)
         
  0.547
Acin_1442
Hypothetical protein (303 aa)
   
          0.509
recG
ATP-dependent DNA helicase recG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (698 aa)
   
   
  0.460
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
Server load: low (14%) [HD]