STRINGSTRING
Acin_1308 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1308" - Transposase, IS4 family protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1308Transposase, IS4 family protein (458 aa)    
Predicted Functional Partners:
Acin_1309
Integrase catalytic region (284 aa)
              0.619
Acin_0609
Rubrerythrin (179 aa)
   
          0.579
Acin_0982
Hypothetical protein (341 aa)
   
          0.481
Acin_0921
Hypothetical protein (1433 aa)
   
          0.456
Acin_0065
Sulfatase (636 aa)
   
          0.440
Acin_1552
Propionate catabolism protein (450 aa)
   
          0.433
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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