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Acin_1314 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1314" - Deoxyribose-phosphate aldolase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1314Deoxyribose-phosphate aldolase (130 aa)    
Predicted Functional Partners:
Acin_1055
Acetaldehyde dehydrogenase/alcohol dehydrogenase (405 aa)
         
    0.900
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose (406 aa)
         
    0.900
Acin_0046
Succinate-semialdehyde dehydrogenase (478 aa)
         
    0.900
Acin_1312
Site-specific recombinase (559 aa)
          0.832
Acin_1311
Site-specific recombinase (522 aa)
          0.805
Acin_1979
Phage terminase small subunit (142 aa)
 
          0.688
Acin_1347
Phage terminase small subunit (142 aa)
 
          0.675
Acin_1945
Site-specific recombinase (505 aa)
          0.576
Acin_1875
Site-specific recombinase (525 aa)
          0.574
Acin_1876
Site-specific recombinase (588 aa)
          0.563
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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