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Acin_1368 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1368" - Hypothetical protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1368Hypothetical protein (554 aa)    
Predicted Functional Partners:
Acin_1369
Hypothetical protein (326 aa)
 
          0.854
Acin_2021
Sugar isomerase (314 aa)
   
          0.693
Acin_1357
Prophage protein (735 aa)
 
          0.584
Acin_0980
Hypothetical protein (75 aa)
   
          0.583
cas9
Crispr-associated protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The t [...] (1358 aa)
   
          0.561
Acin_1936
Hypothetical protein (762 aa)
   
          0.534
Acin_1993
Prophage protein (747 aa)
   
          0.520
Acin_1943
Hypothetical protein (51 aa)
 
          0.515
Acin_2287
Hypothetical protein (418 aa)
   
          0.440
Acin_1367
Hypothetical protein (166 aa)
              0.432
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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