STRINGSTRING
Acin_1403 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1403" - Hypothetical protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1403Hypothetical protein (266 aa)    
Predicted Functional Partners:
Acin_1402
Hypothetical protein (113 aa)
              0.859
Acin_1401
Hypothetical protein (97 aa)
              0.859
Acin_1241
Phage terminase large subunit (418 aa)
 
     
  0.612
Acin_1386
Phage terminase large subunit (364 aa)
 
     
  0.611
Acin_1996
Phage regulatory protein rha (224 aa)
       
  0.589
Acin_1381
Putative head protein (601 aa)
 
          0.563
Acin_1360
Phage regulatory protein rha (220 aa)
       
  0.562
Acin_1938
Prophage antirepressor (265 aa)
 
       
0.556
Acin_1351
DNA-cytosine methyltransferase (503 aa)
 
          0.526
Acin_1252
Recombination and repair protein recT (262 aa)
 
          0.469
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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