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Acin_1439 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1439" - Hypothetical protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1439Hypothetical protein (185 aa)    
Predicted Functional Partners:
Acin_1438
Riboflavin biosynthesis protein ribD (240 aa)
 
          0.889
Acin_1437
Hypothetical protein (357 aa)
              0.834
Acin_1440
Hypothetical protein (332 aa)
 
        0.765
Acin_1441
Hypothetical protein (333 aa)
 
          0.719
Acin_1442
Hypothetical protein (303 aa)
 
          0.685
pyrB
Aspartate carbamoyltransferase (318 aa)
     
      0.628
Acin_1409
Hypothetical protein (636 aa)
   
      0.488
Acin_0797
Hypothetical protein (923 aa)
   
      0.488
Acin_0240
Hypothetical protein (702 aa)
   
      0.488
Acin_0354
Serine/threonine protein kinase (649 aa)
     
      0.481
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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