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rpoZ protein (Acidaminococcus intestini) - STRING interaction network
"rpoZ" - DNA-directed RNA polymerase in Acidaminococcus intestini
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
rpoZDNA-directed RNA polymerase; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (68 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (323 aa)
   
  0.999
rpoB
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1219 aa)
   
  0.999
rpoC
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1327 aa)
   
  0.999
nusG
NusG antitermination factor; Participates in transcription elongation, termination and antitermination (185 aa)
   
  0.984
Acin_1846
Putative DEAH-family helicase (454 aa)
     
    0.982
Acin_1396
DNA or RNA helicases of superfamily II (535 aa)
     
    0.982
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (209 aa)
   
   
  0.969
Acin_2344
50S ribosomal protein L7ae (84 aa)
   
 
  0.963
Acin_1991
Hypothetical protein (457 aa)
   
    0.962
Acin_1933
SNF2-related protein (366 aa)
   
    0.962
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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