STRINGSTRING
Acin_1509 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1509" - Hypothetical protein in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1509Hypothetical protein (220 aa)    
Predicted Functional Partners:
Acin_1508
Hypothetical protein (296 aa)
              0.778
Acin_1507
Hypothetical protein (94 aa)
              0.734
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (209 aa)
              0.733
rpoZ
DNA-directed RNA polymerase; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (68 aa)
              0.675
coaBC
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase (400 aa)
              0.653
Acin_1510
Fibronectin/fibrinogen-binding protein (574 aa)
              0.629
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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