STRINGSTRING
Acin_1540 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1540" - Biotin synthetase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1540Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism (315 aa)    
Predicted Functional Partners:
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (228 aa)
 
 
  0.997
bioA
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (446 aa)
   
  0.985
birA
biotin-(acetyl-CoA carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor (331 aa)
   
 
  0.957
Acin_2229
Fe-hydrogenase assembly protein (373 aa)
       
  0.806
Acin_1499
Radical SAM family protein (352 aa)
       
  0.806
kbl
8-amino-7-oxononanoate synthase (408 aa)
   
  0.794
miaB
RNA modification enzyme; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (441 aa)
     
 
  0.613
Acin_2290
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1167 aa)
         
  0.574
Acin_2032
Pyruvate-ferredoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1178 aa)
         
  0.574
Acin_1089
Hypothetical protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1168 aa)
         
  0.574
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
Server load: low (10%) [HD]