STRINGSTRING
Acin_1550 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1550" - Amino acid ABC transporter permease in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1550Amino acid ABC transporter permease (229 aa)    
Predicted Functional Partners:
Acin_1548
Hypothetical protein (269 aa)
  0.990
Acin_1551
L-cystine-binding protein tcyJ (277 aa)
 
  0.968
Acin_1721
Polar amino acid ABC transporter (241 aa)
 
  0.963
Acin_1723
Periplasmic glutamine-binding protein (265 aa)
 
  0.952
Acin_1724
Periplasmic glutamine-binding protein (263 aa)
 
  0.949
Acin_1719
Hypothetical protein (243 aa)
  0.935
Acin_1763
Extracellular solute-binding protein (279 aa)
 
  0.932
Acin_1549
Hypothetical protein (240 aa)
 
       
0.889
Acin_1553
Glutathione S-transferase (365 aa)
 
          0.714
Acin_1552
Propionate catabolism protein (450 aa)
              0.685
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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