STRINGSTRING
Acin_1678 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1678" - Methyltransferase fkbM in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1678Methyltransferase fkbM (355 aa)    
Predicted Functional Partners:
Acin_1679
Peptidase M48 (366 aa)
              0.829
Acin_1803
Hypothetical protein (678 aa)
   
          0.693
Acin_0841
OstA family protein (533 aa)
   
          0.647
Acin_1680
Hypothetical protein (165 aa)
              0.582
Acin_0634
OstA family protein (282 aa)
   
          0.582
Acin_1287
Hypothetical protein (1032 aa)
   
          0.544
Acin_1677
Hypothetical protein (337 aa)
              0.536
Acin_1775
Hypothetical protein (1439 aa)
   
          0.473
Acin_1804
Diacylglycerol kinase (315 aa)
 
          0.423
sbcD
Nuclease sbcCD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (398 aa)
              0.415
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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